Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.61■□□□□ 0.57
Nkx1-2P42580 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.6■□□□□ 0.57
Nkx1-2P42580 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.6■□□□□ 0.57
Nkx1-2P42580 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx1-2P42580 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Gm11780-201ENSMUST00000136880 516 ntBASIC18.59■□□□□ 0.57
Nkx1-2P42580 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Gm28033-201ENSMUST00000184224 96 ntBASIC18.59■□□□□ 0.57
Nkx1-2P42580 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.59■□□□□ 0.57
Nkx1-2P42580 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC18.59■□□□□ 0.57
Nkx1-2P42580 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nkx1-2P42580 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx1-2P42580 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nkx1-2P42580 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Gm27646-201ENSMUST00000183989 110 ntBASIC18.58■□□□□ 0.56
Nkx1-2P42580 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nkx1-2P42580 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx1-2P42580 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx1-2P42580 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx1-2P42580 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx1-2P42580 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx1-2P42580 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx1-2P42580 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms