Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Cdh4P39038 Gm9727-201ENSMUST00000161387 555 ntBASIC14.47□□□□□ -0.09
Cdh4P39038 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.47□□□□□ -0.09
Cdh4P39038 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdh4P39038 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.47□□□□□ -0.09
Cdh4P39038 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdh4P39038 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdh4P39038 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.46□□□□□ -0.09
Cdh4P39038 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Gm12260-201ENSMUST00000122447 411 ntBASIC14.46□□□□□ -0.09
Cdh4P39038 Gm27525-201ENSMUST00000184465 107 ntBASIC14.46□□□□□ -0.09
Cdh4P39038 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.46□□□□□ -0.09
Cdh4P39038 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Gm18246-201ENSMUST00000221023 728 ntBASIC14.46□□□□□ -0.09
Cdh4P39038 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cdh4P39038 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdh4P39038 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdh4P39038 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh4P39038 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh4P39038 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cdh4P39038 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh4P39038 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdh4P39038 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.45□□□□□ -0.1
Cdh4P39038 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Cdh4P39038 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.45□□□□□ -0.1
Cdh4P39038 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cdh4P39038 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.45□□□□□ -0.1
Cdh4P39038 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Cdh4P39038 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdh4P39038 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdh4P39038 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.44□□□□□ -0.1
Cdh4P39038 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdh4P39038 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdh4P39038 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cdh4P39038 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdh4P39038 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdh4P39038 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cdh4P39038 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.44□□□□□ -0.1
Cdh4P39038 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.44□□□□□ -0.1
Cdh4P39038 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms