Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.35□□□□□ -0.43
Rab5cP35278 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.35□□□□□ -0.43
Rab5cP35278 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rab5cP35278 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rab5cP35278 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rab5cP35278 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.35□□□□□ -0.43
Rab5cP35278 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab5cP35278 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rab5cP35278 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rab5cP35278 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.34□□□□□ -0.43
Rab5cP35278 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.34□□□□□ -0.43
Rab5cP35278 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.34□□□□□ -0.43
Rab5cP35278 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab5cP35278 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.34□□□□□ -0.43
Rab5cP35278 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rab5cP35278 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab5cP35278 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rab5cP35278 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rab5cP35278 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.33□□□□□ -0.44
Rab5cP35278 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Gm27405-201ENSMUST00000184201 112 ntBASIC12.33□□□□□ -0.44
Rab5cP35278 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Rab5cP35278 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.33□□□□□ -0.44
Rab5cP35278 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rab5cP35278 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rab5cP35278 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Rab5cP35278 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rab5cP35278 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rab5cP35278 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rab5cP35278 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Gm11539-201ENSMUST00000119837 557 ntBASIC12.32□□□□□ -0.44
Rab5cP35278 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rab5cP35278 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms