Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sftpa1P35242 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sftpa1P35242 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.91□□□□□ -0.18
Sftpa1P35242 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.91□□□□□ -0.18
Sftpa1P35242 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.91□□□□□ -0.18
Sftpa1P35242 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sftpa1P35242 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.91□□□□□ -0.18
Sftpa1P35242 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sftpa1P35242 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Gm27533-201ENSMUST00000183800 152 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Gm44344-201ENSMUST00000200287 129 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.9□□□□□ -0.18
Sftpa1P35242 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sftpa1P35242 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sftpa1P35242 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sftpa1P35242 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Sftpa1P35242 Gm27838-201ENSMUST00000184829 128 ntBASIC13.89□□□□□ -0.19
Sftpa1P35242 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sftpa1P35242 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms