Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Slc6a1P31648 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.05□□□□□ -0.32
Slc6a1P31648 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Slc6a1P31648 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Slc6a1P31648 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.05□□□□□ -0.32
Slc6a1P31648 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.04□□□□□ -0.32
Slc6a1P31648 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.04□□□□□ -0.32
Slc6a1P31648 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Slc6a1P31648 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.04□□□□□ -0.32
Slc6a1P31648 Gm26039-201ENSMUST00000158152 144 ntBASIC13.04□□□□□ -0.32
Slc6a1P31648 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Slc6a1P31648 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.04□□□□□ -0.32
Slc6a1P31648 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Slc6a1P31648 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.03□□□□□ -0.32
Slc6a1P31648 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Slc6a1P31648 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Slc6a1P31648 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.02□□□□□ -0.32
Slc6a1P31648 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.02□□□□□ -0.32
Slc6a1P31648 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Slc6a1P31648 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Slc6a1P31648 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Slc6a1P31648 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.02□□□□□ -0.33
Slc6a1P31648 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.02□□□□□ -0.33
Slc6a1P31648 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.02□□□□□ -0.33
Slc6a1P31648 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Slc6a1P31648 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Slc6a1P31648 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms