Protein–RNA interactions for Protein: P30204

Msr1, Macrophage scavenger receptor types I and II, mousemouse

Known RBP Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msr1P30204 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Msr1P30204 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Msr1P30204 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Msr1P30204 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Msr1P30204 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Msr1P30204 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Msr1P30204 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.62□□□□□ -0.07
Msr1P30204 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.62□□□□□ -0.07
Msr1P30204 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Msr1P30204 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Msr1P30204 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Msr1P30204 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Msr1P30204 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.61□□□□□ -0.07
Msr1P30204 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.61□□□□□ -0.07
Msr1P30204 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Msr1P30204 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Gm10013-201ENSMUST00000106074 672 ntBASIC14.61□□□□□ -0.07
Msr1P30204 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Gm6623-201ENSMUST00000173570 544 ntBASIC14.61□□□□□ -0.07
Msr1P30204 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.61□□□□□ -0.07
Msr1P30204 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Gm7367-201ENSMUST00000057611 492 ntBASIC14.61□□□□□ -0.07
Msr1P30204 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Msr1P30204 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.61□□□□□ -0.07
Msr1P30204 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Msr1P30204 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Msr1P30204 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Msr1P30204 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msr1P30204 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msr1P30204 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Msr1P30204 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msr1P30204 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msr1P30204 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Msr1P30204 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.6□□□□□ -0.07
Msr1P30204 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Msr1P30204 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Msr1P30204 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Msr1P30204 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms