Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl3P27659 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl3P27659 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpl3P27659 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl3P27659 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl3P27659 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl3P27659 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl3P27659 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpl3P27659 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.34□□□□□ -0.11
Rpl3P27659 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.34□□□□□ -0.11
Rpl3P27659 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Gm10499-201ENSMUST00000174094 934 ntBASIC14.34□□□□□ -0.11
Rpl3P27659 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.34□□□□□ -0.11
Rpl3P27659 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.34□□□□□ -0.11
Rpl3P27659 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpl3P27659 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rpl3P27659 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.34□□□□□ -0.11
Rpl3P27659 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpl3P27659 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpl3P27659 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpl3P27659 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Rpl3P27659 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl3P27659 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rpl3P27659 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl3P27659 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl3P27659 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl3P27659 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl3P27659 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl3P27659 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Rpl3P27659 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl3P27659 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rpl3P27659 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rpl3P27659 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl3P27659 Gm37153-201ENSMUST00000193637 231 ntBASIC14.33□□□□□ -0.12
Rpl3P27659 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl3P27659 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl3P27659 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl3P27659 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rpl3P27659 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Rpl3P27659 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rpl3P27659 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl3P27659 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rpl3P27659 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpl3P27659 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Gm7222-201ENSMUST00000117512 906 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 Gm13418-201ENSMUST00000119097 944 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Gm28033-201ENSMUST00000184224 96 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 Gm6089-201ENSMUST00000197666 938 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 Gm43347-201ENSMUST00000200226 580 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpl3P27659 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Rpl3P27659 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpl3P27659 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.32□□□□□ -0.12
Rpl3P27659 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl3P27659 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl3P27659 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms