Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.49■□□□□ 0.23
Pde6bP23440 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.49■□□□□ 0.23
Pde6bP23440 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pde6bP23440 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.48■□□□□ 0.23
Pde6bP23440 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Pde6bP23440 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
Pde6bP23440 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.48■□□□□ 0.23
Pde6bP23440 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.48■□□□□ 0.23
Pde6bP23440 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pde6bP23440 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.48■□□□□ 0.23
Pde6bP23440 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.48■□□□□ 0.23
Pde6bP23440 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.48■□□□□ 0.23
Pde6bP23440 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.48■□□□□ 0.23
Pde6bP23440 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pde6bP23440 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pde6bP23440 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Sybu-209ENSMUST00000228639 4113 ntBASIC16.47■□□□□ 0.23
Pde6bP23440 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pde6bP23440 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pde6bP23440 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.47■□□□□ 0.23
Pde6bP23440 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pde6bP23440 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.47■□□□□ 0.23
Pde6bP23440 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Mir6990-201ENSMUST00000183724 91 ntBASIC16.47■□□□□ 0.23
Pde6bP23440 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.47■□□□□ 0.23
Pde6bP23440 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Pde6bP23440 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pde6bP23440 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.47■□□□□ 0.23
Pde6bP23440 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.47■□□□□ 0.23
Pde6bP23440 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pde6bP23440 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.47■□□□□ 0.23
Pde6bP23440 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pde6bP23440 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pde6bP23440 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.46■□□□□ 0.23
Pde6bP23440 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Pde6bP23440 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Gm20553-201ENSMUST00000204205 844 ntBASIC16.46■□□□□ 0.23
Pde6bP23440 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.46■□□□□ 0.23
Pde6bP23440 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.46■□□□□ 0.23
Pde6bP23440 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pde6bP23440 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms