Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm3P21107 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm3P21107 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm3P21107 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tpm3P21107 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm3P21107 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm3P21107 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tpm3P21107 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.94■□□□□ 0.3
Tpm3P21107 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.94■□□□□ 0.3
Tpm3P21107 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.94■□□□□ 0.3
Tpm3P21107 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tpm3P21107 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tpm3P21107 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.93■□□□□ 0.3
Tpm3P21107 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tpm3P21107 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tpm3P21107 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.93■□□□□ 0.3
Tpm3P21107 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tpm3P21107 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.93■□□□□ 0.3
Tpm3P21107 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.93■□□□□ 0.3
Tpm3P21107 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tpm3P21107 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.93■□□□□ 0.3
Tpm3P21107 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tpm3P21107 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tpm3P21107 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.92■□□□□ 0.3
Tpm3P21107 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Tpm3P21107 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tpm3P21107 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Tpm3P21107 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tpm3P21107 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms