Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdx1P18111 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.24□□□□□ -0.45
Cdx1P18111 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdx1P18111 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx1P18111 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.23□□□□□ -0.45
Cdx1P18111 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdx1P18111 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdx1P18111 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdx1P18111 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.23□□□□□ -0.45
Cdx1P18111 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.23□□□□□ -0.45
Cdx1P18111 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.23□□□□□ -0.45
Cdx1P18111 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.23□□□□□ -0.45
Cdx1P18111 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm10566-201ENSMUST00000086739 996 ntBASIC12.23□□□□□ -0.45
Cdx1P18111 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Cdx1P18111 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx1P18111 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx1P18111 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx1P18111 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdx1P18111 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx1P18111 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Cdx1P18111 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdx1P18111 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdx1P18111 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Mir770-201ENSMUST00000103252 94 ntBASIC12.22□□□□□ -0.45
Cdx1P18111 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdx1P18111 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdx1P18111 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdx1P18111 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdx1P18111 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx1P18111 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.22□□□□□ -0.45
Cdx1P18111 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.22□□□□□ -0.45
Cdx1P18111 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.21□□□□□ -0.45
Cdx1P18111 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx1P18111 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdx1P18111 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.21□□□□□ -0.45
Cdx1P18111 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx1P18111 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms