Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cntn1P12960 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.5□□□□□ -0.09
Cntn1P12960 Thap2-203ENSMUST00000218989 527 ntBASIC14.5□□□□□ -0.09
Cntn1P12960 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.5□□□□□ -0.09
Cntn1P12960 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cntn1P12960 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.49□□□□□ -0.09
Cntn1P12960 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cntn1P12960 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.49□□□□□ -0.09
Cntn1P12960 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Gm27301-201ENSMUST00000184012 127 ntBASIC14.49□□□□□ -0.09
Cntn1P12960 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.49□□□□□ -0.09
Cntn1P12960 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.49□□□□□ -0.09
Cntn1P12960 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cntn1P12960 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cntn1P12960 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.49□□□□□ -0.09
Cntn1P12960 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cntn1P12960 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cntn1P12960 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cntn1P12960 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cntn1P12960 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.48□□□□□ -0.09
Cntn1P12960 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Cntn1P12960 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cntn1P12960 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.48□□□□□ -0.09
Cntn1P12960 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cntn1P12960 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cntn1P12960 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.48□□□□□ -0.09
Cntn1P12960 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.48□□□□□ -0.09
Cntn1P12960 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cntn1P12960 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cntn1P12960 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cntn1P12960 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.47□□□□□ -0.09
Cntn1P12960 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cntn1P12960 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.47□□□□□ -0.09
Cntn1P12960 Gm15427-201ENSMUST00000117288 531 ntBASIC14.47□□□□□ -0.09
Cntn1P12960 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.47□□□□□ -0.09
Cntn1P12960 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.47□□□□□ -0.09
Cntn1P12960 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.47□□□□□ -0.09
Cntn1P12960 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cntn1P12960 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.47□□□□□ -0.09
Cntn1P12960 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Cntn1P12960 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cntn1P12960 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms