Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25911-201ENSMUST00000157621 56 ntBASIC11.78□□□□□ -0.52
Hoxd3P09027 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Gm10499-201ENSMUST00000174094 934 ntBASIC11.78□□□□□ -0.52
Hoxd3P09027 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxd3P09027 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.78□□□□□ -0.52
Hoxd3P09027 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hoxd3P09027 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Hoxd3P09027 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxd3P09027 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxd3P09027 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxd3P09027 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxd3P09027 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxd3P09027 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.77□□□□□ -0.53
Hoxd3P09027 Gm43575-201ENSMUST00000196420 516 ntBASIC11.77□□□□□ -0.53
Hoxd3P09027 Gm45878-201ENSMUST00000211839 241 ntBASIC11.77□□□□□ -0.53
Hoxd3P09027 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.77□□□□□ -0.53
Hoxd3P09027 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxd3P09027 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.76□□□□□ -0.53
Hoxd3P09027 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.76□□□□□ -0.53
Hoxd3P09027 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Gm36991-201ENSMUST00000191800 648 ntBASIC11.76□□□□□ -0.53
Hoxd3P09027 Gm44492-201ENSMUST00000197012 141 ntBASIC11.76□□□□□ -0.53
Hoxd3P09027 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.76□□□□□ -0.53
Hoxd3P09027 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.76□□□□□ -0.53
Hoxd3P09027 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hoxd3P09027 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Hoxd3P09027 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.75□□□□□ -0.53
Hoxd3P09027 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxd3P09027 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxd3P09027 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Hoxd3P09027 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.75□□□□□ -0.53
Hoxd3P09027 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hoxd3P09027 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.75□□□□□ -0.53
Hoxd3P09027 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Hoxd3P09027 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxd3P09027 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxd3P09027 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms