Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sod1P08228 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sod1P08228 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sod1P08228 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sod1P08228 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.11□□□□□ -0.15
Sod1P08228 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Gm11424-201ENSMUST00000121929 829 ntBASIC14.11□□□□□ -0.15
Sod1P08228 Gm16215-201ENSMUST00000161990 637 ntBASIC14.11□□□□□ -0.15
Sod1P08228 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Shd-206ENSMUST00000225145 998 ntBASIC14.11□□□□□ -0.15
Sod1P08228 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.11□□□□□ -0.15
Sod1P08228 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sod1P08228 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sod1P08228 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Sod1P08228 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.1□□□□□ -0.15
Sod1P08228 Gm44855-201ENSMUST00000205725 362 ntBASIC14.1□□□□□ -0.15
Sod1P08228 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sod1P08228 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sod1P08228 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sod1P08228 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.1□□□□□ -0.15
Sod1P08228 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sod1P08228 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sod1P08228 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sod1P08228 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sod1P08228 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Gm15321-201ENSMUST00000121290 288 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.09□□□□□ -0.15
Sod1P08228 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sod1P08228 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sod1P08228 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm29310-201ENSMUST00000185468 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21825-201ENSMUST00000185728 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm29109-201ENSMUST00000185895 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21896-201ENSMUST00000186520 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21873-201ENSMUST00000186728 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21794-201ENSMUST00000187056 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21880-201ENSMUST00000187275 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21826-201ENSMUST00000187451 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21198-201ENSMUST00000188393 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21749-201ENSMUST00000189343 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21901-201ENSMUST00000189568 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm29424-201ENSMUST00000189716 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm28599-201ENSMUST00000189838 694 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21867-201ENSMUST00000189917 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm29269-201ENSMUST00000190087 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21722-201ENSMUST00000190153 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.09□□□□□ -0.15
Sod1P08228 Gm28423-201ENSMUST00000190701 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21899-201ENSMUST00000190745 696 ntBASIC14.09□□□□□ -0.15
Sod1P08228 Gm21910-201ENSMUST00000191163 696 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms