Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.31□□□□□ -0.12
ApoeP08226 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ApoeP08226 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Gm12008-201ENSMUST00000117791 755 ntBASIC14.31□□□□□ -0.12
ApoeP08226 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.31□□□□□ -0.12
ApoeP08226 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.31□□□□□ -0.12
ApoeP08226 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ApoeP08226 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ApoeP08226 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ApoeP08226 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.31□□□□□ -0.12
ApoeP08226 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.31□□□□□ -0.12
ApoeP08226 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ApoeP08226 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.3□□□□□ -0.12
ApoeP08226 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Celf4-206ENSMUST00000224553 1729 ntBASIC14.3□□□□□ -0.12
ApoeP08226 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.3□□□□□ -0.12
ApoeP08226 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.3□□□□□ -0.12
ApoeP08226 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.3□□□□□ -0.12
ApoeP08226 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.3□□□□□ -0.12
ApoeP08226 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.3□□□□□ -0.12
ApoeP08226 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ApoeP08226 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.3□□□□□ -0.12
ApoeP08226 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ApoeP08226 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
ApoeP08226 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
ApoeP08226 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ApoeP08226 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.3□□□□□ -0.12
ApoeP08226 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ApoeP08226 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ApoeP08226 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.29□□□□□ -0.12
ApoeP08226 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ApoeP08226 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.29□□□□□ -0.12
ApoeP08226 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ApoeP08226 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.29□□□□□ -0.12
ApoeP08226 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ApoeP08226 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ApoeP08226 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ApoeP08226 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.29□□□□□ -0.12
ApoeP08226 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.29□□□□□ -0.12
ApoeP08226 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ApoeP08226 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Gm10013-201ENSMUST00000106074 672 ntBASIC14.28□□□□□ -0.12
ApoeP08226 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ApoeP08226 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.28□□□□□ -0.12
ApoeP08226 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.28□□□□□ -0.12
ApoeP08226 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ApoeP08226 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ApoeP08226 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.28□□□□□ -0.12
ApoeP08226 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.28□□□□□ -0.12
ApoeP08226 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.28□□□□□ -0.12
ApoeP08226 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.28□□□□□ -0.12
ApoeP08226 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms