Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.88■□□□□ 0.45
Col3a1P08121 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.88■□□□□ 0.45
Col3a1P08121 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.88■□□□□ 0.45
Col3a1P08121 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Gm8410-201ENSMUST00000117225 605 ntBASIC17.88■□□□□ 0.45
Col3a1P08121 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Col3a1P08121 Gm17837-201ENSMUST00000186435 985 ntBASIC17.88■□□□□ 0.45
Col3a1P08121 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.88■□□□□ 0.45
Col3a1P08121 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.88■□□□□ 0.45
Col3a1P08121 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Col3a1P08121 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Gm27437-201ENSMUST00000183429 107 ntBASIC17.87■□□□□ 0.45
Col3a1P08121 Gm5745-201ENSMUST00000183748 313 ntBASIC17.87■□□□□ 0.45
Col3a1P08121 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.87■□□□□ 0.45
Col3a1P08121 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Col3a1P08121 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Col3a1P08121 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.86■□□□□ 0.45
Col3a1P08121 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.86■□□□□ 0.45
Col3a1P08121 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.86■□□□□ 0.45
Col3a1P08121 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col3a1P08121 Gm37230-201ENSMUST00000194491 818 ntBASIC17.86■□□□□ 0.45
Col3a1P08121 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.86■□□□□ 0.45
Col3a1P08121 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.86■□□□□ 0.45
Col3a1P08121 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.86■□□□□ 0.45
Col3a1P08121 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col3a1P08121 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.85■□□□□ 0.45
Col3a1P08121 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.85■□□□□ 0.45
Col3a1P08121 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.85■□□□□ 0.45
Col3a1P08121 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Col3a1P08121 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Col3a1P08121 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.85■□□□□ 0.45
Col3a1P08121 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col3a1P08121 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col3a1P08121 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col3a1P08121 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Col3a1P08121 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col3a1P08121 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col3a1P08121 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col3a1P08121 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Col3a1P08121 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms