Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
P06344 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.46□□□□□ -0.25
P06344 Gm25911-201ENSMUST00000157621 56 ntBASIC13.46□□□□□ -0.25
P06344 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.46□□□□□ -0.25
P06344 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.46□□□□□ -0.25
P06344 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.46□□□□□ -0.25
P06344 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.46□□□□□ -0.25
P06344 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.46□□□□□ -0.25
P06344 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P06344 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
P06344 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.46□□□□□ -0.26
P06344 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06344 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P06344 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
P06344 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
P06344 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
P06344 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.45□□□□□ -0.26
P06344 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
P06344 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.45□□□□□ -0.26
P06344 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
P06344 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.45□□□□□ -0.26
P06344 Gm27702-201ENSMUST00000184512 56 ntBASIC13.45□□□□□ -0.26
P06344 Gm17968-201ENSMUST00000194902 784 ntBASIC13.45□□□□□ -0.26
P06344 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
P06344 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
P06344 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
P06344 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P06344 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Gm14822-201ENSMUST00000122247 291 ntBASIC13.44□□□□□ -0.26
P06344 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Gm24513-201ENSMUST00000174964 138 ntBASIC13.44□□□□□ -0.26
P06344 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Gm5177-201ENSMUST00000183092 997 ntBASIC13.44□□□□□ -0.26
P06344 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.44□□□□□ -0.26
P06344 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
P06344 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
P06344 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
P06344 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
P06344 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.43□□□□□ -0.26
P06344 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
P06344 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms