Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Gm27628-201ENSMUST00000184911 107 ntBASIC12.25□□□□□ -0.45
P04940 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.25□□□□□ -0.45
P04940 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
P04940 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
P04940 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
P04940 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
P04940 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
P04940 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.24□□□□□ -0.45
P04940 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
P04940 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
P04940 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.24□□□□□ -0.45
P04940 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.24□□□□□ -0.45
P04940 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
P04940 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.24□□□□□ -0.45
P04940 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
P04940 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
P04940 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P04940 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.23□□□□□ -0.45
P04940 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Gm27300-201ENSMUST00000184085 97 ntBASIC12.23□□□□□ -0.45
P04940 Gm27335-201ENSMUST00000184758 97 ntBASIC12.23□□□□□ -0.45
P04940 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Gm2651-201ENSMUST00000203560 838 ntBASIC12.23□□□□□ -0.45
P04940 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.23□□□□□ -0.45
P04940 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
P04940 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.23□□□□□ -0.45
P04940 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
P04940 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P04940 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms