Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.36■□□□□ 0.53
Col4a1P02463 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 BC037039-201ENSMUST00000192003 2205 ntBASIC18.36■□□□□ 0.53
Col4a1P02463 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.36■□□□□ 0.53
Col4a1P02463 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a1P02463 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.35■□□□□ 0.53
Col4a1P02463 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.35■□□□□ 0.53
Col4a1P02463 Gm14928-201ENSMUST00000120198 477 ntBASIC18.35■□□□□ 0.53
Col4a1P02463 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC18.35■□□□□ 0.53
Col4a1P02463 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Col4a1P02463 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.35■□□□□ 0.53
Col4a1P02463 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Col4a1P02463 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC18.35■□□□□ 0.53
Col4a1P02463 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a1P02463 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.34■□□□□ 0.53
Col4a1P02463 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Col4a1P02463 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col4a1P02463 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.34■□□□□ 0.53
Col4a1P02463 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Col4a1P02463 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Gm9794-201ENSMUST00000202370 423 ntBASIC18.34■□□□□ 0.53
Col4a1P02463 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.34■□□□□ 0.53
Col4a1P02463 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a1P02463 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col4a1P02463 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a1P02463 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a1P02463 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.33■□□□□ 0.52
Col4a1P02463 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Gm9522-201ENSMUST00000182394 926 ntBASIC18.33■□□□□ 0.52
Col4a1P02463 Gm45453-201ENSMUST00000211758 853 ntBASIC18.33■□□□□ 0.52
Col4a1P02463 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.33■□□□□ 0.52
Col4a1P02463 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.33■□□□□ 0.52
Col4a1P02463 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a1P02463 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.32■□□□□ 0.52
Col4a1P02463 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.32■□□□□ 0.52
Col4a1P02463 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.32■□□□□ 0.52
Col4a1P02463 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.32■□□□□ 0.52
Col4a1P02463 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.32■□□□□ 0.52
Col4a1P02463 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.32■□□□□ 0.52
Col4a1P02463 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Col4a1P02463 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a1P02463 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Col4a1P02463 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.31■□□□□ 0.52
Col4a1P02463 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.31■□□□□ 0.52
Col4a1P02463 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms