Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hbb-b1P02088 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.68□□□□□ -0.7
Hbb-b1P02088 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.67□□□□□ -0.7
Hbb-b1P02088 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Gm6257-201ENSMUST00000163864 910 ntBASIC10.67□□□□□ -0.7
Hbb-b1P02088 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Gm18421-201ENSMUST00000204122 625 ntBASIC10.67□□□□□ -0.7
Hbb-b1P02088 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Rab3c-203ENSMUST00000224180 967 ntBASIC10.67□□□□□ -0.7
Hbb-b1P02088 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.67□□□□□ -0.7
Hbb-b1P02088 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Hbb-b1P02088 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.66□□□□□ -0.7
Hbb-b1P02088 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.66□□□□□ -0.7
Hbb-b1P02088 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Gm37292-201ENSMUST00000192062 758 ntBASIC10.66□□□□□ -0.7
Hbb-b1P02088 Gm26524-201ENSMUST00000192339 390 ntBASIC10.66□□□□□ -0.7
Hbb-b1P02088 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Gm18671-201ENSMUST00000214826 683 ntBASIC10.66□□□□□ -0.7
Hbb-b1P02088 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hbb-b1P02088 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms