Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp1O89090 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp1O89090 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.22■□□□□ 0.03
Sp1O89090 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.22■□□□□ 0.03
Sp1O89090 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.22■□□□□ 0.03
Sp1O89090 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.22■□□□□ 0.03
Sp1O89090 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sp1O89090 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.22■□□□□ 0.03
Sp1O89090 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Sp1O89090 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sp1O89090 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Asic1-205ENSMUST00000228185 1818 ntBASIC15.22■□□□□ 0.03
Sp1O89090 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp1O89090 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sp1O89090 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.21■□□□□ 0.03
Sp1O89090 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Sp1O89090 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Gm25925-201ENSMUST00000158314 306 ntBASIC15.21■□□□□ 0.03
Sp1O89090 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
Sp1O89090 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sp1O89090 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Gm5312-201ENSMUST00000203728 547 ntBASIC15.21■□□□□ 0.03
Sp1O89090 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.21■□□□□ 0.03
Sp1O89090 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sp1O89090 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sp1O89090 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Sp1O89090 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp1O89090 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Sp1O89090 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp1O89090 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp1O89090 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp1O89090 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp1O89090 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp1O89090 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp1O89090 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sp1O89090 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.2■□□□□ 0.02
Sp1O89090 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.2■□□□□ 0.02
Sp1O89090 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.2■□□□□ 0.02
Sp1O89090 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Sp1O89090 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.2■□□□□ 0.02
Sp1O89090 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.2■□□□□ 0.02
Sp1O89090 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.2■□□□□ 0.02
Sp1O89090 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.2■□□□□ 0.02
Sp1O89090 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.2■□□□□ 0.02
Sp1O89090 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Sp1O89090 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp1O89090 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Sp1O89090 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp1O89090 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Sp1O89090 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms