Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.51■□□□□ 0.07
Syn1O88935 Gm8318-201ENSMUST00000182954 872 ntBASIC15.51■□□□□ 0.07
Syn1O88935 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.51■□□□□ 0.07
Syn1O88935 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.51■□□□□ 0.07
Syn1O88935 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Syn1O88935 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Syn1O88935 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.5■□□□□ 0.07
Syn1O88935 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Syn1O88935 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.5■□□□□ 0.07
Syn1O88935 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Syn1O88935 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Syn1O88935 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Syn1O88935 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Syn1O88935 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Syn1O88935 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Syn1O88935 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Syn1O88935 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.49■□□□□ 0.07
Syn1O88935 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Syn1O88935 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Asic1-205ENSMUST00000228185 1818 ntBASIC15.49■□□□□ 0.07
Syn1O88935 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Syn1O88935 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Syn1O88935 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.48■□□□□ 0.07
Syn1O88935 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.48■□□□□ 0.07
Syn1O88935 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Syn1O88935 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.48■□□□□ 0.07
Syn1O88935 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Syn1O88935 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.48■□□□□ 0.07
Syn1O88935 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Syn1O88935 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.48■□□□□ 0.07
Syn1O88935 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.48■□□□□ 0.07
Syn1O88935 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Syn1O88935 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Syn1O88935 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Gm14042-201ENSMUST00000120139 833 ntBASIC15.47■□□□□ 0.07
Syn1O88935 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.47■□□□□ 0.07
Syn1O88935 Gm16026-204ENSMUST00000162652 683 ntBASIC15.47■□□□□ 0.07
Syn1O88935 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Syn1O88935 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Syn1O88935 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms