Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm24496-201ENSMUST00000178287 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm25649-201ENSMUST00000178476 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm25548-201ENSMUST00000178681 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm23147-201ENSMUST00000178841 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm26095-201ENSMUST00000179270 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm22171-201ENSMUST00000179283 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm23936-201ENSMUST00000179354 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm22619-201ENSMUST00000179516 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm25255-201ENSMUST00000179579 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24755-201ENSMUST00000179691 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm26506-201ENSMUST00000179692 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm25086-201ENSMUST00000179931 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm23243-201ENSMUST00000180047 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24659-201ENSMUST00000180212 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm24169-201ENSMUST00000180244 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm23689-201ENSMUST00000180354 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm27359-201ENSMUST00000184153 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm27785-201ENSMUST00000184268 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm27466-201ENSMUST00000184396 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Gm27703-201ENSMUST00000184836 110 ntBASIC14.49□□□□□ -0.09
Best1O88870 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.49□□□□□ -0.09
Best1O88870 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.49□□□□□ -0.09
Best1O88870 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.49□□□□□ -0.09
Best1O88870 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Best1O88870 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.49□□□□□ -0.09
Best1O88870 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.49□□□□□ -0.09
Best1O88870 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.49□□□□□ -0.09
Best1O88870 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.49□□□□□ -0.09
Best1O88870 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Best1O88870 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.48□□□□□ -0.09
Best1O88870 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.48□□□□□ -0.09
Best1O88870 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.48□□□□□ -0.09
Best1O88870 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.48□□□□□ -0.09
Best1O88870 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.48□□□□□ -0.09
Best1O88870 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.48□□□□□ -0.09
Best1O88870 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.48□□□□□ -0.09
Best1O88870 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Best1O88870 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.48□□□□□ -0.09
Best1O88870 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Best1O88870 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Best1O88870 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Best1O88870 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.47□□□□□ -0.09
Best1O88870 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Best1O88870 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.47□□□□□ -0.09
Best1O88870 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Best1O88870 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.47□□□□□ -0.09
Best1O88870 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.47□□□□□ -0.09
Best1O88870 Gm15483-201ENSMUST00000120338 456 ntBASIC14.47□□□□□ -0.09
Best1O88870 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.47□□□□□ -0.09
Best1O88870 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Best1O88870 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms