Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gm5566-201ENSMUST00000116118 459 ntBASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gm12742-201ENSMUST00000117326 410 ntBASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gm9719-201ENSMUST00000162765 543 ntBASIC13.98□□□□□ -0.17
Tnfrsf17O88472 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Tnfrsf17O88472 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Gm45841-201ENSMUST00000207700 164 ntBASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Tnfrsf17O88472 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Gm43703-201ENSMUST00000200523 763 ntBASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Gm18624-201ENSMUST00000220966 658 ntBASIC13.96□□□□□ -0.17
Tnfrsf17O88472 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Tnfrsf17O88472 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms