Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vti1bO88384 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Vti1bO88384 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vti1bO88384 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.43□□□□□ -0.1
Vti1bO88384 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.43□□□□□ -0.1
Vti1bO88384 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.43□□□□□ -0.1
Vti1bO88384 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vti1bO88384 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Vti1bO88384 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.43□□□□□ -0.1
Vti1bO88384 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.43□□□□□ -0.1
Vti1bO88384 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.43□□□□□ -0.1
Vti1bO88384 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Birc2-201ENSMUST00000054878 378 ntBASIC14.43□□□□□ -0.1
Vti1bO88384 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vti1bO88384 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vti1bO88384 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Vti1bO88384 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vti1bO88384 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Gm17971-201ENSMUST00000190239 806 ntBASIC14.42□□□□□ -0.1
Vti1bO88384 Gm34391-201ENSMUST00000203706 907 ntBASIC14.42□□□□□ -0.1
Vti1bO88384 Gm7506-201ENSMUST00000207758 815 ntBASIC14.42□□□□□ -0.1
Vti1bO88384 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vti1bO88384 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vti1bO88384 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vti1bO88384 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vti1bO88384 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
Vti1bO88384 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.41□□□□□ -0.1
Vti1bO88384 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vti1bO88384 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm8825-201ENSMUST00000182565 998 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm4518-201ENSMUST00000182638 718 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vti1bO88384 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.41□□□□□ -0.1
Vti1bO88384 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms