Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IkbkbO88351 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IkbkbO88351 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
IkbkbO88351 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IkbkbO88351 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Gm15467-201ENSMUST00000120582 445 ntBASIC16.71■□□□□ 0.27
IkbkbO88351 Gm9727-201ENSMUST00000161387 555 ntBASIC16.71■□□□□ 0.27
IkbkbO88351 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
IkbkbO88351 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
IkbkbO88351 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.71■□□□□ 0.27
IkbkbO88351 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.71■□□□□ 0.27
IkbkbO88351 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.71■□□□□ 0.27
IkbkbO88351 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
IkbkbO88351 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.71■□□□□ 0.27
IkbkbO88351 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IkbkbO88351 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.71■□□□□ 0.26
IkbkbO88351 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
IkbkbO88351 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
IkbkbO88351 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
IkbkbO88351 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.7■□□□□ 0.26
IkbkbO88351 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.7■□□□□ 0.26
IkbkbO88351 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
IkbkbO88351 Gm4899-201ENSMUST00000178708 719 ntBASIC16.7■□□□□ 0.26
IkbkbO88351 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.7■□□□□ 0.26
IkbkbO88351 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.7■□□□□ 0.26
IkbkbO88351 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.7■□□□□ 0.26
IkbkbO88351 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.7■□□□□ 0.26
IkbkbO88351 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IkbkbO88351 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
IkbkbO88351 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
IkbkbO88351 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
IkbkbO88351 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.69■□□□□ 0.26
IkbkbO88351 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.69■□□□□ 0.26
IkbkbO88351 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.69■□□□□ 0.26
IkbkbO88351 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Gm11594-201ENSMUST00000122313 162 ntBASIC16.69■□□□□ 0.26
IkbkbO88351 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.69■□□□□ 0.26
IkbkbO88351 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.69■□□□□ 0.26
IkbkbO88351 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
IkbkbO88351 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.69■□□□□ 0.26
IkbkbO88351 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.69■□□□□ 0.26
IkbkbO88351 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IkbkbO88351 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
IkbkbO88351 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
IkbkbO88351 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IkbkbO88351 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IkbkbO88351 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IkbkbO88351 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IkbkbO88351 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms