Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Tnnt1O88346 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.29■□□□□ 0.68
Tnnt1O88346 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.29■□□□□ 0.68
Tnnt1O88346 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.29■□□□□ 0.68
Tnnt1O88346 Gm10576-201ENSMUST00000191927 825 ntBASIC19.29■□□□□ 0.68
Tnnt1O88346 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnnt1O88346 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Tnnt1O88346 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnnt1O88346 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.28■□□□□ 0.68
Tnnt1O88346 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnnt1O88346 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.28■□□□□ 0.68
Tnnt1O88346 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.28■□□□□ 0.68
Tnnt1O88346 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnnt1O88346 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.27■□□□□ 0.68
Tnnt1O88346 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Gm8396-201ENSMUST00000057361 823 ntBASIC19.27■□□□□ 0.68
Tnnt1O88346 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tnnt1O88346 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnnt1O88346 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tnnt1O88346 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tnnt1O88346 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnnt1O88346 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnnt1O88346 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnnt1O88346 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.27■□□□□ 0.67
Tnnt1O88346 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.26■□□□□ 0.67
Tnnt1O88346 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.26■□□□□ 0.67
Tnnt1O88346 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gm18889-201ENSMUST00000174284 929 ntBASIC19.26■□□□□ 0.67
Tnnt1O88346 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.26■□□□□ 0.67
Tnnt1O88346 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.26■□□□□ 0.67
Tnnt1O88346 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Tnnt1O88346 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tnnt1O88346 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnnt1O88346 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Tnnt1O88346 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Tnnt1O88346 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.25■□□□□ 0.67
Tnnt1O88346 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnnt1O88346 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnnt1O88346 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnnt1O88346 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnnt1O88346 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms