Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC19.46■□□□□ 0.71
Nid2O88322 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.46■□□□□ 0.71
Nid2O88322 Gm10766-202ENSMUST00000194123 606 ntBASIC19.46■□□□□ 0.71
Nid2O88322 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nid2O88322 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nid2O88322 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nid2O88322 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.46■□□□□ 0.71
Nid2O88322 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nid2O88322 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nid2O88322 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
Nid2O88322 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.45■□□□□ 0.7
Nid2O88322 Gm13829-201ENSMUST00000119600 138 ntBASIC19.45■□□□□ 0.7
Nid2O88322 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC19.45■□□□□ 0.7
Nid2O88322 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Gm28760-201ENSMUST00000185995 736 ntBASIC19.45■□□□□ 0.7
Nid2O88322 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Nid2O88322 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nid2O88322 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Nid2O88322 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Gm9797-201ENSMUST00000052902 613 ntBASIC19.45■□□□□ 0.7
Nid2O88322 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Nid2O88322 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nid2O88322 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nid2O88322 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nid2O88322 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nid2O88322 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC19.44■□□□□ 0.7
Nid2O88322 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Nid2O88322 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nid2O88322 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nid2O88322 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nid2O88322 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.43■□□□□ 0.7
Nid2O88322 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC19.43■□□□□ 0.7
Nid2O88322 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Nid2O88322 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nid2O88322 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nid2O88322 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nid2O88322 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nid2O88322 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.42■□□□□ 0.7
Nid2O88322 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC19.42■□□□□ 0.7
Nid2O88322 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 Gm11918-201ENSMUST00000121660 179 ntBASIC19.42■□□□□ 0.7
Nid2O88322 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nid2O88322 Gm6266-201ENSMUST00000203844 806 ntBASIC19.42■□□□□ 0.7
Nid2O88322 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 AC153962.4-201ENSMUST00000217878 242 ntBASIC19.42■□□□□ 0.7
Nid2O88322 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nid2O88322 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nid2O88322 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nid2O88322 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.41■□□□□ 0.7
Nid2O88322 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 Dancr-204ENSMUST00000132389 2347 ntBASIC19.41■□□□□ 0.7
Nid2O88322 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.41■□□□□ 0.7
Nid2O88322 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nid2O88322 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms