Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trdmt1O55055 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Gm7775-201ENSMUST00000218871 853 ntBASIC16.57■□□□□ 0.24
Trdmt1O55055 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdmt1O55055 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.56■□□□□ 0.24
Trdmt1O55055 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm14719-201ENSMUST00000121891 340 ntBASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm11424-201ENSMUST00000121929 829 ntBASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm15487-201ENSMUST00000122373 465 ntBASIC16.56■□□□□ 0.24
Trdmt1O55055 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm44344-201ENSMUST00000200287 129 ntBASIC16.56■□□□□ 0.24
Trdmt1O55055 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdmt1O55055 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trdmt1O55055 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trdmt1O55055 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.55■□□□□ 0.24
Trdmt1O55055 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.55■□□□□ 0.24
Trdmt1O55055 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Gm5479-201ENSMUST00000160578 435 ntBASIC16.55■□□□□ 0.24
Trdmt1O55055 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Gm7730-201ENSMUST00000212486 454 ntBASIC16.55■□□□□ 0.24
Trdmt1O55055 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.55■□□□□ 0.24
Trdmt1O55055 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trdmt1O55055 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trdmt1O55055 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.54■□□□□ 0.24
Trdmt1O55055 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.54■□□□□ 0.24
Trdmt1O55055 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdmt1O55055 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Trdmt1O55055 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.53■□□□□ 0.24
Trdmt1O55055 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trdmt1O55055 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Gm5566-201ENSMUST00000116118 459 ntBASIC16.53■□□□□ 0.24
Trdmt1O55055 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.53■□□□□ 0.24
Trdmt1O55055 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trdmt1O55055 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdmt1O55055 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms