Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm6218-201ENSMUST00000219812 628 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cacna1bO55017 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.56□□□□□ -0.08
Cacna1bO55017 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cacna1bO55017 Gm6180-201ENSMUST00000065243 498 ntBASIC14.56□□□□□ -0.08
Cacna1bO55017 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cacna1bO55017 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.56□□□□□ -0.08
Cacna1bO55017 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.56□□□□□ -0.08
Cacna1bO55017 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cacna1bO55017 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Gm15321-201ENSMUST00000121290 288 ntBASIC14.55□□□□□ -0.08
Cacna1bO55017 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.55□□□□□ -0.08
Cacna1bO55017 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.55□□□□□ -0.08
Cacna1bO55017 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Gm29667-201ENSMUST00000190817 490 ntBASIC14.55□□□□□ -0.08
Cacna1bO55017 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cacna1bO55017 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cacna1bO55017 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cacna1bO55017 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.54□□□□□ -0.08
Cacna1bO55017 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm16215-201ENSMUST00000161990 637 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm42612-201ENSMUST00000197986 623 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm43170-201ENSMUST00000199827 612 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cacna1bO55017 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cacna1bO55017 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.54□□□□□ -0.08
Cacna1bO55017 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms