Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Kcnu1O54982 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Kcnu1O54982 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Carlr-201ENSMUST00000181515 2574 ntBASIC16.09■□□□□ 0.17
Kcnu1O54982 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Gm7862-201ENSMUST00000121461 292 ntBASIC16.09■□□□□ 0.17
Kcnu1O54982 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Kcnu1O54982 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Kcnu1O54982 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Kcnu1O54982 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Kcnu1O54982 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Kcnu1O54982 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Kcnu1O54982 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Gm7222-201ENSMUST00000117512 906 ntBASIC16.08■□□□□ 0.16
Kcnu1O54982 Gm11452-201ENSMUST00000122376 690 ntBASIC16.08■□□□□ 0.16
Kcnu1O54982 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Kcnu1O54982 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.08■□□□□ 0.16
Kcnu1O54982 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Kcnu1O54982 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Kcnu1O54982 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Kcnu1O54982 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.07■□□□□ 0.16
Kcnu1O54982 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Kcnu1O54982 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.07■□□□□ 0.16
Kcnu1O54982 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Gm6550-201ENSMUST00000187574 993 ntBASIC16.07■□□□□ 0.16
Kcnu1O54982 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.07■□□□□ 0.16
Kcnu1O54982 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Kcnu1O54982 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.07■□□□□ 0.16
Kcnu1O54982 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Kcnu1O54982 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Kcnu1O54982 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Kcnu1O54982 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Kcnu1O54982 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Kcnu1O54982 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Kcnu1O54982 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Kcnu1O54982 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Kcnu1O54982 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms