Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.72□□□□□ -0.21
Rnf13O54965 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.72□□□□□ -0.21
Rnf13O54965 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf13O54965 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rnf13O54965 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.72□□□□□ -0.21
Rnf13O54965 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rnf13O54965 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf13O54965 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf13O54965 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rnf13O54965 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.71□□□□□ -0.21
Rnf13O54965 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.71□□□□□ -0.21
Rnf13O54965 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.71□□□□□ -0.21
Rnf13O54965 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf13O54965 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm44454-201ENSMUST00000198541 138 ntBASIC13.71□□□□□ -0.21
Rnf13O54965 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.71□□□□□ -0.21
Rnf13O54965 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Rnf13O54965 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Rnf13O54965 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf13O54965 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Rnf13O54965 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf13O54965 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.71□□□□□ -0.22
Rnf13O54965 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.7□□□□□ -0.22
Rnf13O54965 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.7□□□□□ -0.22
Rnf13O54965 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.7□□□□□ -0.22
Rnf13O54965 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.7□□□□□ -0.22
Rnf13O54965 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf13O54965 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf13O54965 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.69□□□□□ -0.22
Rnf13O54965 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf13O54965 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms