Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.24■□□□□ 0.19
Nr1i3O35627 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.24■□□□□ 0.19
Nr1i3O35627 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.24■□□□□ 0.19
Nr1i3O35627 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nr1i3O35627 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1i3O35627 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Gm25990-201ENSMUST00000102440 86 ntBASIC16.23■□□□□ 0.19
Nr1i3O35627 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.23■□□□□ 0.19
Nr1i3O35627 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Gm9682-201ENSMUST00000197505 556 ntBASIC16.23■□□□□ 0.19
Nr1i3O35627 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Birc2-201ENSMUST00000054878 378 ntBASIC16.23■□□□□ 0.19
Nr1i3O35627 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nr1i3O35627 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1i3O35627 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.22■□□□□ 0.19
Nr1i3O35627 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Gm28033-201ENSMUST00000184224 96 ntBASIC16.22■□□□□ 0.19
Nr1i3O35627 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.22■□□□□ 0.19
Nr1i3O35627 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Nr1i3O35627 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1i3O35627 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nr1i3O35627 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1i3O35627 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nr1i3O35627 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.21■□□□□ 0.19
Nr1i3O35627 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms