Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcn6O35454 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.45■□□□□ 0.22
Clcn6O35454 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn6O35454 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.44■□□□□ 0.22
Clcn6O35454 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Clcn6O35454 AA414768-201ENSMUST00000121924 1257 ntBASIC16.44■□□□□ 0.22
Clcn6O35454 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Gm27389-201ENSMUST00000183622 195 ntBASIC16.44■□□□□ 0.22
Clcn6O35454 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Gm37860-201ENSMUST00000195380 1034 ntBASIC16.44■□□□□ 0.22
Clcn6O35454 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC16.44■□□□□ 0.22
Clcn6O35454 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 AC153522.1-201ENSMUST00000220047 1090 ntBASIC16.44■□□□□ 0.22
Clcn6O35454 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Clcn6O35454 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn6O35454 Gm20541-201ENSMUST00000173035 1406 ntBASIC16.44■□□□□ 0.22
Clcn6O35454 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn6O35454 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.43■□□□□ 0.22
Clcn6O35454 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.43■□□□□ 0.22
Clcn6O35454 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clcn6O35454 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Clcn6O35454 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.43■□□□□ 0.22
Clcn6O35454 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clcn6O35454 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.43■□□□□ 0.22
Clcn6O35454 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC16.43■□□□□ 0.22
Clcn6O35454 Gm43596-201ENSMUST00000202818 884 ntBASIC16.43■□□□□ 0.22
Clcn6O35454 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.43■□□□□ 0.22
Clcn6O35454 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Clcn6O35454 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Clcn6O35454 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.43■□□□□ 0.22
Clcn6O35454 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn6O35454 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Clcn6O35454 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.43■□□□□ 0.22
Clcn6O35454 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Clcn6O35454 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.42■□□□□ 0.22
Clcn6O35454 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clcn6O35454 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn6O35454 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn6O35454 Gm43052-201ENSMUST00000201451 1628 ntBASIC16.42■□□□□ 0.22
Clcn6O35454 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms