Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capn1O35350 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capn1O35350 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Capn1O35350 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capn1O35350 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capn1O35350 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Capn1O35350 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Capn1O35350 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.02□□□□□ -0.17
Capn1O35350 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Capn1O35350 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Capn1O35350 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Capn1O35350 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Capn1O35350 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Capn1O35350 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.01□□□□□ -0.17
Capn1O35350 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.01□□□□□ -0.17
Capn1O35350 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.01□□□□□ -0.17
Capn1O35350 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Capn1O35350 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Capn1O35350 Gm19164-201ENSMUST00000210667 640 ntBASIC14.01□□□□□ -0.17
Capn1O35350 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.01□□□□□ -0.17
Capn1O35350 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.01□□□□□ -0.17
Capn1O35350 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Capn1O35350 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.01□□□□□ -0.17
Capn1O35350 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Capn1O35350 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Capn1O35350 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14□□□□□ -0.17
Capn1O35350 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14□□□□□ -0.17
Capn1O35350 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14□□□□□ -0.17
Capn1O35350 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Gm42901-201ENSMUST00000197735 3171 ntBASIC14□□□□□ -0.17
Capn1O35350 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Capn1O35350 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14□□□□□ -0.17
Capn1O35350 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.99□□□□□ -0.17
Capn1O35350 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Gm18489-201ENSMUST00000172565 551 ntBASIC13.99□□□□□ -0.17
Capn1O35350 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms