Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.82□□□□□ -0.52
Tnfsf11O35235 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfsf11O35235 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.82□□□□□ -0.52
Tnfsf11O35235 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfsf11O35235 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Gm13559-201ENSMUST00000120476 863 ntBASIC11.81□□□□□ -0.52
Tnfsf11O35235 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Mir5130-201ENSMUST00000175160 84 ntBASIC11.81□□□□□ -0.52
Tnfsf11O35235 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.81□□□□□ -0.52
Tnfsf11O35235 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfsf11O35235 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm37722-201ENSMUST00000193757 208 ntBASIC11.8□□□□□ -0.52
Tnfsf11O35235 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.8□□□□□ -0.52
Tnfsf11O35235 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tnfsf11O35235 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.79□□□□□ -0.52
Tnfsf11O35235 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tnfsf11O35235 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.79□□□□□ -0.52
Tnfsf11O35235 Gm45058-201ENSMUST00000205810 766 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms