Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col15a1O35206 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col15a1O35206 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col15a1O35206 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Gm15653-201ENSMUST00000119247 907 ntBASIC19.2■□□□□ 0.66
Col15a1O35206 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.2■□□□□ 0.66
Col15a1O35206 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.2■□□□□ 0.66
Col15a1O35206 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col15a1O35206 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.2■□□□□ 0.66
Col15a1O35206 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Col15a1O35206 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.2■□□□□ 0.66
Col15a1O35206 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Col15a1O35206 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.2■□□□□ 0.66
Col15a1O35206 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.2■□□□□ 0.66
Col15a1O35206 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col15a1O35206 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col15a1O35206 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col15a1O35206 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm45195-201ENSMUST00000205597 1008 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.19■□□□□ 0.66
Col15a1O35206 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.19■□□□□ 0.66
Col15a1O35206 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col15a1O35206 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.19■□□□□ 0.66
Col15a1O35206 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.19■□□□□ 0.66
Col15a1O35206 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm6222-201ENSMUST00000120787 396 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.19■□□□□ 0.66
Col15a1O35206 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm42612-201ENSMUST00000197986 623 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 Gm43170-201ENSMUST00000199827 612 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.19■□□□□ 0.66
Col15a1O35206 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Gm6180-201ENSMUST00000065243 498 ntBASIC19.19■□□□□ 0.66
Col15a1O35206 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col15a1O35206 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.18■□□□□ 0.66
Col15a1O35206 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Col15a1O35206 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Col15a1O35206 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.18■□□□□ 0.66
Col15a1O35206 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.18■□□□□ 0.66
Col15a1O35206 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.18■□□□□ 0.66
Col15a1O35206 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col15a1O35206 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Col15a1O35206 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.17■□□□□ 0.66
Col15a1O35206 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col15a1O35206 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.17■□□□□ 0.66
Col15a1O35206 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col15a1O35206 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Col15a1O35206 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Col15a1O35206 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col15a1O35206 Gm14127-201ENSMUST00000117906 678 ntBASIC19.17■□□□□ 0.66
Col15a1O35206 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms