Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.58■□□□□ 0.56
Dctn1O08788 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.58■□□□□ 0.56
Dctn1O08788 Gm23547-201ENSMUST00000158210 271 ntBASIC18.58■□□□□ 0.56
Dctn1O08788 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.58■□□□□ 0.56
Dctn1O08788 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Dctn1O08788 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.58■□□□□ 0.56
Dctn1O08788 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Dctn1O08788 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Dctn1O08788 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Dctn1O08788 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.58■□□□□ 0.56
Dctn1O08788 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Dctn1O08788 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Dctn1O08788 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.57■□□□□ 0.56
Dctn1O08788 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.57■□□□□ 0.56
Dctn1O08788 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Dctn1O08788 Gm5866-201ENSMUST00000177881 973 ntBASIC18.57■□□□□ 0.56
Dctn1O08788 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.57■□□□□ 0.56
Dctn1O08788 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Dctn1O08788 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.57■□□□□ 0.56
Dctn1O08788 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.57■□□□□ 0.56
Dctn1O08788 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Gm2423-201ENSMUST00000074863 733 ntBASIC18.57■□□□□ 0.56
Dctn1O08788 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Dctn1O08788 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Dctn1O08788 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Gm13453-201ENSMUST00000118708 357 ntBASIC18.56■□□□□ 0.56
Dctn1O08788 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.56■□□□□ 0.56
Dctn1O08788 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.56■□□□□ 0.56
Dctn1O08788 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.56■□□□□ 0.56
Dctn1O08788 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.56■□□□□ 0.56
Dctn1O08788 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.56■□□□□ 0.56
Dctn1O08788 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Dctn1O08788 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 App-207ENSMUST00000227737 2827 ntBASIC18.56■□□□□ 0.56
Dctn1O08788 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Dctn1O08788 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.56■□□□□ 0.56
Dctn1O08788 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Dctn1O08788 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Dctn1O08788 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Dctn1O08788 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.55■□□□□ 0.56
Dctn1O08788 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Dctn1O08788 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Dctn1O08788 Gm18766-201ENSMUST00000189811 808 ntBASIC18.55■□□□□ 0.56
Dctn1O08788 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Gm18049-201ENSMUST00000208909 581 ntBASIC18.55■□□□□ 0.56
Dctn1O08788 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.55■□□□□ 0.56
Dctn1O08788 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.55■□□□□ 0.56
Dctn1O08788 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Dctn1O08788 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Dctn1O08788 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Dctn1O08788 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Dctn1O08788 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms