Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp35M0QWN7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp35M0QWN7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp35M0QWN7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp35M0QWN7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp35M0QWN7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp35M0QWN7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp35M0QWN7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.22■□□□□ 0.19
Usp35M0QWN7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Gm9682-201ENSMUST00000197505 556 ntBASIC16.22■□□□□ 0.19
Usp35M0QWN7 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.22■□□□□ 0.19
Usp35M0QWN7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp35M0QWN7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.21■□□□□ 0.19
Usp35M0QWN7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 BC037039-201ENSMUST00000192003 2205 ntBASIC16.21■□□□□ 0.19
Usp35M0QWN7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp35M0QWN7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp35M0QWN7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp35M0QWN7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp35M0QWN7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp35M0QWN7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp35M0QWN7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Gm26308-201ENSMUST00000157768 69 ntBASIC16.2■□□□□ 0.18
Usp35M0QWN7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.2■□□□□ 0.18
Usp35M0QWN7 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.2■□□□□ 0.18
Usp35M0QWN7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp35M0QWN7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms