Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NpcdF8VQB8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Gm18766-201ENSMUST00000189811 808 ntBASIC18.13■□□□□ 0.49
NpcdF8VQB8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NpcdF8VQB8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Gm23984-201ENSMUST00000157139 203 ntBASIC18.12■□□□□ 0.49
NpcdF8VQB8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.12■□□□□ 0.49
NpcdF8VQB8 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NpcdF8VQB8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Gm18018-201ENSMUST00000198273 408 ntBASIC18.11■□□□□ 0.49
NpcdF8VQB8 Gm6218-201ENSMUST00000219812 628 ntBASIC18.11■□□□□ 0.49
NpcdF8VQB8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NpcdF8VQB8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NpcdF8VQB8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NpcdF8VQB8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms