Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.22□□□□□ -0.13
Colca2F8VPY8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Gm13464-201ENSMUST00000119418 935 ntBASIC14.21□□□□□ -0.13
Colca2F8VPY8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Colca2F8VPY8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Colca2F8VPY8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Colca2F8VPY8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.21□□□□□ -0.14
Colca2F8VPY8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Colca2F8VPY8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.21□□□□□ -0.14
Colca2F8VPY8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Colca2F8VPY8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Colca2F8VPY8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Colca2F8VPY8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.2□□□□□ -0.14
Colca2F8VPY8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.2□□□□□ -0.14
Colca2F8VPY8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Gm43630-201ENSMUST00000201550 776 ntBASIC14.2□□□□□ -0.14
Colca2F8VPY8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.2□□□□□ -0.14
Colca2F8VPY8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Colca2F8VPY8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.19□□□□□ -0.14
Colca2F8VPY8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Colca2F8VPY8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Gm9002-201ENSMUST00000178437 499 ntBASIC14.19□□□□□ -0.14
Colca2F8VPY8 Mir6392-201ENSMUST00000184924 108 ntBASIC14.19□□□□□ -0.14
Colca2F8VPY8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.19□□□□□ -0.14
Colca2F8VPY8 Gm19220-201ENSMUST00000222682 803 ntBASIC14.19□□□□□ -0.14
Colca2F8VPY8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Colca2F8VPY8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Colca2F8VPY8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms