Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh11xF6ZNL5 Gm15590-201ENSMUST00000078419 552 ntBASIC16.69■□□□□ 0.26
Pcdh11xF6ZNL5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh11xF6ZNL5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Sybu-209ENSMUST00000228639 4113 ntBASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Gm13036-201ENSMUST00000117799 748 ntBASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh11xF6ZNL5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Gm18246-201ENSMUST00000221023 728 ntBASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh11xF6ZNL5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Gm14140-201ENSMUST00000119999 995 ntBASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh11xF6ZNL5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdh11xF6ZNL5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms