Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 AA543401-201ENSMUST00000164248 1269 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Gm24158-201ENSMUST00000175263 71 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Gm25948-201ENSMUST00000175334 112 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Gm10253-201ENSMUST00000194270 940 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Gm7774-201ENSMUST00000200064 533 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.31■□□□□ 0.04
Ccdc149F6V035 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc149F6V035 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm22065-201ENSMUST00000103753 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm22066-201ENSMUST00000103761 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24932-201ENSMUST00000103763 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24115-201ENSMUST00000103799 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm22190-201ENSMUST00000103827 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm22191-201ENSMUST00000103831 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24721-201ENSMUST00000103849 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm28018-201ENSMUST00000103869 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm26399-201ENSMUST00000103937 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm25349-201ENSMUST00000177728 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm23616-201ENSMUST00000177797 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm25871-201ENSMUST00000177816 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24752-201ENSMUST00000178240 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24496-201ENSMUST00000178287 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm25649-201ENSMUST00000178476 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm25548-201ENSMUST00000178681 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm23147-201ENSMUST00000178841 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm26095-201ENSMUST00000179270 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm22171-201ENSMUST00000179283 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm23936-201ENSMUST00000179354 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm22619-201ENSMUST00000179516 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm25255-201ENSMUST00000179579 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24755-201ENSMUST00000179691 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm26506-201ENSMUST00000179692 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm25086-201ENSMUST00000179931 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm23243-201ENSMUST00000180047 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24659-201ENSMUST00000180212 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm24169-201ENSMUST00000180244 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm23689-201ENSMUST00000180354 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm27359-201ENSMUST00000184153 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm27785-201ENSMUST00000184268 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm27466-201ENSMUST00000184396 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm27430-201ENSMUST00000184585 107 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm27703-201ENSMUST00000184836 110 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Gm44333-201ENSMUST00000197168 107 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.3■□□□□ 0.04
Ccdc149F6V035 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ccdc149F6V035 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.29■□□□□ 0.04
Ccdc149F6V035 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ccdc149F6V035 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms