Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ube4aE9Q735 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ube4aE9Q735 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ube4aE9Q735 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Gm5479-201ENSMUST00000160578 435 ntBASIC18.07■□□□□ 0.48
Ube4aE9Q735 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Gm6888-201ENSMUST00000221983 706 ntBASIC18.07■□□□□ 0.48
Ube4aE9Q735 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ube4aE9Q735 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Gm12151-201ENSMUST00000121374 290 ntBASIC18.06■□□□□ 0.48
Ube4aE9Q735 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.06■□□□□ 0.48
Ube4aE9Q735 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ube4aE9Q735 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ube4aE9Q735 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Gm27989-201ENSMUST00000184721 107 ntBASIC18.05■□□□□ 0.48
Ube4aE9Q735 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.05■□□□□ 0.48
Ube4aE9Q735 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.05■□□□□ 0.48
Ube4aE9Q735 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ube4aE9Q735 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ube4aE9Q735 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms