Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.69□□□□□ -0.22
Gm3543D3Z235 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm3543D3Z235 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.68□□□□□ -0.22
Gm3543D3Z235 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm15467-201ENSMUST00000120582 445 ntBASIC13.68□□□□□ -0.22
Gm3543D3Z235 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm12260-201ENSMUST00000122447 411 ntBASIC13.68□□□□□ -0.22
Gm3543D3Z235 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm5682-201ENSMUST00000173402 505 ntBASIC13.68□□□□□ -0.22
Gm3543D3Z235 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.68□□□□□ -0.22
Gm3543D3Z235 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gm3543D3Z235 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.67□□□□□ -0.22
Gm3543D3Z235 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Gm2213-201ENSMUST00000197485 688 ntBASIC13.67□□□□□ -0.22
Gm3543D3Z235 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.67□□□□□ -0.22
Gm3543D3Z235 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Gm3543D3Z235 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gm3543D3Z235 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms