Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.54□□□□□ -0.24
Shank1D3YZU1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.54□□□□□ -0.24
Shank1D3YZU1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Gm18737-201ENSMUST00000173594 937 ntBASIC13.54□□□□□ -0.24
Shank1D3YZU1 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shank1D3YZU1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shank1D3YZU1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Shank1D3YZU1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Gm6888-201ENSMUST00000221983 706 ntBASIC13.52□□□□□ -0.24
Shank1D3YZU1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shank1D3YZU1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.52□□□□□ -0.25
Shank1D3YZU1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Shank1D3YZU1 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.52□□□□□ -0.25
Shank1D3YZU1 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.52□□□□□ -0.25
Shank1D3YZU1 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.52□□□□□ -0.25
Shank1D3YZU1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shank1D3YZU1 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm14722-201ENSMUST00000118943 689 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm25144-201ENSMUST00000179561 110 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm25352-201ENSMUST00000179815 110 ntBASIC13.51□□□□□ -0.25
Shank1D3YZU1 Gm27920-201ENSMUST00000183953 96 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms