Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp42B2RQC2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp42B2RQC2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Gm14494-201ENSMUST00000118786 435 ntBASIC17.64■□□□□ 0.41
Usp42B2RQC2 Gm15467-201ENSMUST00000120582 445 ntBASIC17.64■□□□□ 0.41
Usp42B2RQC2 Mir8117-201ENSMUST00000184773 107 ntBASIC17.64■□□□□ 0.41
Usp42B2RQC2 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.64■□□□□ 0.41
Usp42B2RQC2 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.64■□□□□ 0.41
Usp42B2RQC2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp42B2RQC2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.63■□□□□ 0.41
Usp42B2RQC2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Usp42B2RQC2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.62■□□□□ 0.41
Usp42B2RQC2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.62■□□□□ 0.41
Usp42B2RQC2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.62■□□□□ 0.41
Usp42B2RQC2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Gm10175-201ENSMUST00000086013 645 ntBASIC17.62■□□□□ 0.41
Usp42B2RQC2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp42B2RQC2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.61■□□□□ 0.41
Usp42B2RQC2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp42B2RQC2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms