Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Gm8318-201ENSMUST00000182954 872 ntBASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav12d-1A0N8R0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Gm23547-201ENSMUST00000158210 271 ntBASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Mir6982-201ENSMUST00000184354 68 ntBASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12d-1A0N8R0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Gm12008-201ENSMUST00000117791 755 ntBASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Gm15165-201ENSMUST00000118140 502 ntBASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Gm25745-201ENSMUST00000174945 133 ntBASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav12d-1A0N8R0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms