Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc112A0AUP1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Gm27646-201ENSMUST00000183989 110 ntBASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc112A0AUP1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc112A0AUP1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Gm14859-201ENSMUST00000117752 357 ntBASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Gm12134-201ENSMUST00000122109 520 ntBASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Gm6296-201ENSMUST00000222599 943 ntBASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc112A0AUP1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc112A0AUP1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms