Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm17808-201ENSMUST00000200859 894 ntBASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav13d-4A0A0G2JFX3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms