Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.68□□□□□ -0.7
Igkv4-53A0A0G2JFC6 Gm9103-201ENSMUST00000119371 405 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms